Fuzzy soft rough K-Means clustering approach for gene expression data

نویسندگان

  • K. Dhanalakshmi
  • H. Hannah Inbarani
چکیده

Clustering is one of the widely used data mining techniques for medical diagnosis. Clustering can be considered as the most important unsupervised learning technique. Most of the clustering methods group data based on distance and few methods cluster data based on similarity. The clustering algorithms classify gene expression data into clusters and the functionally related genes are grouped together in an efficient manner. The groupings are constructed such that the degree of relationship is strong among members of the same cluster and weak among members of different clusters. In this work, we focus on a similarity relationship among genes with similar expression patterns so that a consequential and simple analytical decision can be made from the proposed Fuzzy Soft Rough K-Means algorithm. The algorithm is developed based on Fuzzy Soft sets and Rough sets. Comparative analysis of the proposed work is made with bench mark algorithms like K-Means and Rough K-Means and efficiency of the proposed algorithm is illustrated in this work by using various cluster validity measures such as DB index and Xie-Beni index.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Modification of the Fast Global K-means Using a Fuzzy Relation with Application in Microarray Data Analysis

Recognizing genes with distinctive expression levels can help in prevention, diagnosis and treatment of the diseases at the genomic level. In this paper, fast Global k-means (fast GKM) is developed for clustering the gene expression datasets. Fast GKM is a significant improvement of the k-means clustering method. It is an incremental clustering method which starts with one cluster. Iteratively ...

متن کامل

An Analysis of Gene Expression Data using Penalized Fuzzy C-Means Approach

With the rapid advances of microarray technologies, large amounts of high-dimensional gene expression data are being generated, which poses significant computational challenges. A first step towards addressing this challenge is the use of clustering techniques, which is essential in the data mining process to reveal natural structures and identify interesting patterns in the underlying data. A ...

متن کامل

Fuzzy Clustering Approach Using Data Fusion Theory and its Application To Automatic Isolated Word Recognition

 In this paper, utilization of clustering algorithms for data fusion in decision level is proposed. The results of automatic isolated word recognition, which are derived from speech spectrograph and Linear Predictive Coding (LPC) analysis, are combined with each other by using fuzzy clustering algorithms, especially fuzzy k-means and fuzzy vector quantization. Experimental results show that the...

متن کامل

Enforcement of rough fuzzy clustering based on correlation analysis

Clustering is a standard approach in analysis of data and construction of separated similar groups. The most widely used robust soft clustering methods are fuzzy, rough and rough fuzzy clustering. The prominent feature of soft clustering leads to combine the rough and fuzzy sets. The Rough Fuzzy C-Means (RFCM) includes the lower and boundary estimation of rough sets, and fuzzy membership of fuz...

متن کامل

A Survey Paper of Structure Mining Technique using Clustering and Ranking Algorithm

A survey of various link analysis and clustering algorithms such as Page Rank, Hyperlink-Induced Topic Search, Weighted Page Rank based on Visit of Links K-Means, Fuzzy K-Means. Ranking algorithms illustrated, Weighted Page Rank is more efficient than Hyperlink-induced Topic Search Whereas clustering algorithms has described Fuzzy Soft, Rough K-Means is a mixture of Rough K-Means and fuzzy soft...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • CoRR

دوره abs/1212.5359  شماره 

صفحات  -

تاریخ انتشار 2012